Uses of Package
org.expasy.mzjava.glycomics.mol

Packages that use org.expasy.mzjava.glycomics.mol

Package	Description
org.expasy.mzjava.glycomics.io.mol.glycoct
org.expasy.mzjava.glycomics.mol
org.expasy.mzjava.glycomics.ms.fragment
org.expasy.mzjava.glycomics.ms.spectrum

Classes in org.expasy.mzjava.glycomics.mol used by org.expasy.mzjava.glycomics.io.mol.glycoct

Class and Description
Anomericity
Glycan Data structure to represent a Glycan.
Monosaccharide
Substituent

Classes in org.expasy.mzjava.glycomics.mol used by org.expasy.mzjava.glycomics.mol

Class and Description
Anomericity
CleavedMonosaccharide
CrossRingCutType The CrossRingCutType interface allows you to get specific Crossring cleavage sites.
CutDescriptor
CutDirection Because the CutIndexes have the first index always lower than the second, the cutDirection will select the part between the two indexes if it is CLOCK_WISE otherwise it will select the other part of the whole.
CutIndexes This class contains the two carbons where the carbon ring is cut.
Glycan Data structure to represent a Glycan.
GlycanFragment
GlycanMassCalculator
GlycanNode
GlycosidicLinkage
Linkage
LinkageAcceptor
Monosaccharide
MonosaccharideClass
MonosaccharideLookup
MonosaccharideSuperclass
NodeSet This class implements the Set interface with a IdentityHashMap, using reference-equality in place of object-equality when comparing entries.
RingType
SaccharideGraph
SaccharideGraph.AbstractBuilder A builder to build Glycan.
SaccharideGraph.AbstractBuilder.BuildSate
SaccharideGraph.Traversal
SEdge
SNode
Substituent
SubstituentLinkage
SubstituentLookup
TraversalComparator A comparator function for imposing order on the children of a node in a SaccharideGraph.

Classes in org.expasy.mzjava.glycomics.mol used by org.expasy.mzjava.glycomics.ms.fragment

Class and Description
CrossRingCutType The CrossRingCutType interface allows you to get specific Crossring cleavage sites.
Glycan Data structure to represent a Glycan.
GlycanFragment

Classes in org.expasy.mzjava.glycomics.mol used by org.expasy.mzjava.glycomics.ms.spectrum

Class and Description
Glycan Data structure to represent a Glycan.
GlycanFragment