Uses of Class
org.expasy.mzjava.glycomics.mol.Anomericity

Packages that use Anomericity

Package	Description
org.expasy.mzjava.glycomics.io.mol.glycoct
org.expasy.mzjava.glycomics.mol

Uses of Anomericity in org.expasy.mzjava.glycomics.io.mol.glycoct

Methods in org.expasy.mzjava.glycomics.io.mol.glycoct that return types with arguments of type Anomericity

Modifier and Type	Method and Description
com.google.common.base.Optional<Anomericity>	GlycoCtResolver.getAnomericity(String glycoCtCode)
com.google.common.base.Optional<Anomericity>	DefaultGlycoCtResolver.getAnomericity(String glycoCtCode) Returns the appropriate Anomericity instance for the given glycoct code.

Uses of Anomericity in org.expasy.mzjava.glycomics.mol

Methods in org.expasy.mzjava.glycomics.mol that return Anomericity

Modifier and Type	Method and Description
static Anomericity	Anomericity.valueOf(String name) Returns the enum constant of this type with the specified name.
static Anomericity[]	Anomericity.values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods in org.expasy.mzjava.glycomics.mol that return types with arguments of type Anomericity

Modifier and Type	Method and Description
com.google.common.base.Optional<Anomericity>	GlycosidicLinkage.getAnomericity()
com.google.common.base.Optional<Anomericity>	Glycan.getReducingEndAnomericity()

Method parameters in org.expasy.mzjava.glycomics.mol with type arguments of type Anomericity

Modifier and Type	Method and Description
Monosaccharide	Glycan.Builder.setRoot(Monosaccharide monosaccharide, com.google.common.base.Optional<Anomericity> endAnomericity, String databaseIdentifier) Set the root of the Glycan.
Monosaccharide	Glycan.Builder.setRoot(Monosaccharide monosaccharide, com.google.common.base.Optional<Anomericity> endAnomericity, String databaseIdentifier, Composition endComposition) Set the root of the Glycan.

Constructors in org.expasy.mzjava.glycomics.mol with parameters of type Anomericity

Constructor and Description
GlycosidicLinkage(Anomericity anomericity, Integer anomericCarbon, Integer linkedCarbon, Composition anomericComposition, Composition linkedComposition)

Constructor parameters in org.expasy.mzjava.glycomics.mol with type arguments of type Anomericity

Constructor and Description
Glycan(Monosaccharide root, com.google.common.base.Optional<Anomericity> reducingEndAnomericity, String databaseIdentifier, Composition endComposition)
GlycosidicLinkage(com.google.common.base.Optional<Anomericity> anomericity, com.google.common.base.Optional<Integer> anomericCarbon, com.google.common.base.Optional<Integer> linkedCarbon, com.google.common.base.Optional<Composition> anomericComposition, com.google.common.base.Optional<Composition> linkedComposition)