| Interface | Description |
|---|---|
| CrossRingCutType |
The CrossRingCutType interface allows you to get specific Crossring cleavage sites.
|
| GlycanMassCalculator | |
| Linkage | |
| LinkageAcceptor | |
| MonosaccharideLookup | |
| SubstituentLookup | |
| TraversalComparator |
A comparator function for imposing order on the children of a node in a SaccharideGraph.
|
| Class | Description |
|---|---|
| AllCrossRingCutType | |
| CleavedMonosaccharide | |
| CutDescriptor | |
| CutDescriptorGenerator | |
| CutIndexes |
This class contains the two carbons where the carbon ring is cut.
|
| DefaultGlycanMassCalculator | |
| DefaultMonosaccharideLookup | |
| DefaultSubstituentLookup | |
| Glycan |
Data structure to represent a Glycan.
|
| Glycan.Builder |
A builder to build Glycans.
|
| GlycanFragment | |
| GlycanFragment.Builder |
A builder to build Glycosidic Fragments.
|
| GlycanNode | |
| GlycosidicLinkage | |
| Monosaccharide | |
| NodeSet<E> |
This class implements the Set interface with a IdentityHashMap, using
reference-equality in place of object-equality when comparing entries.
|
| SaccharideGraph | |
| SaccharideGraph.AbstractBuilder<G extends SaccharideGraph> |
A builder to build Glycan.
|
| SEdge<N extends GlycanNode,L extends Linkage> | |
| SNode<T> | |
| Substituent | |
| SubstituentLinkage |
| Enum | Description |
|---|---|
| Anomericity | |
| CutDirection |
Because the CutIndexes have the first index always lower than the second, the cutDirection will select the part
between the two indexes if it is CLOCK_WISE otherwise it will select the other part of the whole.
|
| MonosaccharideClass | |
| MonosaccharideSuperclass | |
| RingType | |
| SaccharideGraph.AbstractBuilder.BuildSate | |
| SaccharideGraph.Traversal |
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