org.expasy.mzjava.glycomics.mol

Class CutIndexes

java.lang.Object

org.expasy.mzjava.glycomics.mol.CutIndexes

public class CutIndexes
extends Object

This class contains the two carbons where the carbon ring is cut. If you want to specify a glycosidic cut (where the ring remains intact) please set the first and the second carbons at -1. Each object contains the two index that represent where the monosaccharide ring is cut.

Version:

sqrt -1.

Author:

Davide Alocci

Constructor Summary

Constructors

Constructor and Description
CutIndexes(int firstIndex, int secondIndex)

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(Object o)
int	getFirstIndex() Return the first index of the cleavage
int	getSecondIndex() Return the second index of the cleavage
int	hashCode()
boolean	isGlycosidicCut() Check if the cut is a glycosidic cut
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

CutIndexes

public CutIndexes(int firstIndex,
          int secondIndex)

Method Detail

getFirstIndex

public int getFirstIndex()

Return the first index of the cleavage

Returns:

the first index of the cleavage

getSecondIndex

public int getSecondIndex()

Return the second index of the cleavage

Returns:

the second index of the cleavage

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object

isGlycosidicCut

public boolean isGlycosidicCut()

Check if the cut is a glycosidic cut

Returns:

true if it is a glycosidic cut. false otherwise