Uses of Class
org.expasy.mzjava.glycomics.mol.CleavedMonosaccharide

Packages that use CleavedMonosaccharide

Package	Description
org.expasy.mzjava.glycomics.mol

Uses of CleavedMonosaccharide in org.expasy.mzjava.glycomics.mol

Methods in org.expasy.mzjava.glycomics.mol that return types with arguments of type CleavedMonosaccharide

Modifier and Type	Method and Description
Set<CleavedMonosaccharide>	CutDescriptor.getCleavedMonosaccharides() Return a set of all the cleaved monosaccharides in the CutDescriptor with their CutIndex.
Set<CleavedMonosaccharide>	GlycanFragment.getCleavedNodes() Return a set of cleaved nodes in the fragment

Methods in org.expasy.mzjava.glycomics.mol with parameters of type CleavedMonosaccharide

Modifier and Type	Method and Description
IonType	GlycanFragment.getIonType(CleavedMonosaccharide cleavedMonosaccharide)

Method parameters in org.expasy.mzjava.glycomics.mol with type arguments of type CleavedMonosaccharide

Modifier and Type	Method and Description
void	CutDescriptor.addCleavedMonosaccharides(Set<CleavedMonosaccharide> cleavedMonosaccharides) Add a collection of cleaved monosaccharides edge to the CutDescriptor.

Constructor parameters in org.expasy.mzjava.glycomics.mol with type arguments of type CleavedMonosaccharide

Constructor and Description
CutDescriptor(Set<CleavedMonosaccharide> cleavedMonosaccharidesSet, Set<SEdge> cleavedEdges)
GlycanFragment(Monosaccharide root, FragmentType fragmentType, List<GlycanNode> nodes, List<SEdge> edges, org.expasy.mzjava.glycomics.mol.IdentityEdgeMultimap<Monosaccharide,Monosaccharide,org.expasy.mzjava.glycomics.mol.GlycosidicEdge> monosaccharideEdgeMultimap, org.expasy.mzjava.glycomics.mol.IdentityEdgeMultimap<Monosaccharide,Substituent,org.expasy.mzjava.glycomics.mol.SubstituentEdge> substituentEdgeMultimap, Composition endComposition, Map<CleavedMonosaccharide,IonType> monosaccharideIonTypeMap, Map<SEdge,IonType> edgeIonTypeMap)