org.expasy.mzjava.proteomics.io.ms.ident

Class ProteinPilotModificationResolver

java.lang.Object

org.expasy.mzjava.proteomics.mol.modification.unimod.UnimodModificationResolver

org.expasy.mzjava.proteomics.io.ms.ident.ProteinPilotModificationResolver

All Implemented Interfaces:

ModificationResolver

public class ProteinPilotModificationResolver
extends UnimodModificationResolver

The default ProteinPilot Modification Resolver

Author:

fnikitin

Constructor Summary

Constructors

Constructor and Description
ProteinPilotModificationResolver()

Method Summary

Methods

Modifier and Type	Method and Description
com.google.common.base.Optional<Modification>	resolve(String input) Create or fetch a modification for input

Methods inherited from class org.expasy.mzjava.proteomics.mol.modification.unimod.UnimodModificationResolver

clearOverrides, clearTranslations, putOverrideUnimod, putTranslate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProteinPilotModificationResolver

public ProteinPilotModificationResolver()

Method Detail

resolve

public com.google.common.base.Optional<Modification> resolve(String input)

Description copied from interface: ModificationResolver

Create or fetch a modification for input

Specified by:

resolve in interface ModificationResolver

Overrides:

resolve in class UnimodModificationResolver

Parameters:

input - the input

Returns:

Optional containing the modification if the input can be resolved, Optional.absent if not