Uses of Package
org.expasy.mzjava.proteomics.mol.digest

Packages that use org.expasy.mzjava.proteomics.mol.digest

Package	Description
org.expasy.mzjava.proteomics.mol.digest
org.expasy.mzjava.proteomics.ms.dbsearch

Classes in org.expasy.mzjava.proteomics.mol.digest used by org.expasy.mzjava.proteomics.mol.digest

Class and Description
CleavageSiteFinder
CleavageSiteMatcher This matcher is used to find the sites of cleavage in an amino-acid sequence.
CleavageSiteParseException
CleavageSiteVisitor
DigestionController This interface delegates to callbacks to control the digestion handled by ProteinDigester.
Protease http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
ProteinDigester A ProteinDigester is defined by a name and a cleavage site matcher that match the sites to be digested.
ProteinDigester.Builder
ProteinDigester.CleavageSiteIteration

Classes in org.expasy.mzjava.proteomics.mol.digest used by org.expasy.mzjava.proteomics.ms.dbsearch

Class and Description
DigestionController This interface delegates to callbacks to control the digestion handled by ProteinDigester.
Protease http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
ProteinDigester A ProteinDigester is defined by a name and a cleavage site matcher that match the sites to be digested.