Uses of Class
org.expasy.mzjava.proteomics.mol.digest.Protease

Packages that use Protease

Package	Description
org.expasy.mzjava.proteomics.mol.digest
org.expasy.mzjava.proteomics.ms.dbsearch

Uses of Protease in org.expasy.mzjava.proteomics.mol.digest

Methods in org.expasy.mzjava.proteomics.mol.digest that return Protease

Modifier and Type	Method and Description
static Protease	Protease.valueOf(String name) Returns the enum constant of this type with the specified name.
static Protease[]	Protease.values() Returns an array containing the constants of this enum type, in the order they are declared.

Constructors in org.expasy.mzjava.proteomics.mol.digest with parameters of type Protease

Constructor and Description
ProteinDigester.Builder(Protease protease)

Uses of Protease in org.expasy.mzjava.proteomics.ms.dbsearch

Methods in org.expasy.mzjava.proteomics.ms.dbsearch with parameters of type Protease

Modifier and Type	Method and Description
PeptideSpectrumDB.DigestDSL	PeptideSpectrumDB.DigestDSL.digestWith(Protease protease) Set the Protease that is used to digest the proteins.

Constructors in org.expasy.mzjava.proteomics.ms.dbsearch with parameters of type Protease

Constructor and Description
ArrayDigestDB.Builder(IterativeReader<Protein> reader, Protease protease, int missedCleavages) Create a bulder that build a ArrayDigestDB that digests proteins from the reader using the protease with missedCleavages missed cleavages.