org.expasy.mzjava.proteomics.mol

Class ModifiedPeptideFactory.Builder

java.lang.Object

org.expasy.mzjava.proteomics.mol.ModifiedPeptideFactory.Builder

Enclosing class:

ModifiedPeptideFactory

public static class ModifiedPeptideFactory.Builder
extends Object

Constructor Summary

Constructors

Constructor and Description
ModifiedPeptideFactory.Builder()

Method Summary

Methods

Modifier and Type	Method and Description
ModifiedPeptideFactory.Builder	addTarget(ModAttachment attachment, Modification mod)
ModifiedPeptideFactory.Builder	addTarget(Set<AminoAcid> aas, ModAttachment attachment, Modification mod)
ModifiedPeptideFactory.Builder	addTarget(Set<AminoAcid> aas, Modification mod)
ModifiedPeptideFactory	build()
ModifiedPeptideFactory.Builder	limit(int varSiteMax)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ModifiedPeptideFactory.Builder

public ModifiedPeptideFactory.Builder()

Method Detail

addTarget

public ModifiedPeptideFactory.Builder addTarget(Set<AminoAcid> aas,
                                       Modification mod)

addTarget

public ModifiedPeptideFactory.Builder addTarget(Set<AminoAcid> aas,
                                       ModAttachment attachment,
                                       Modification mod)

addTarget

public ModifiedPeptideFactory.Builder addTarget(ModAttachment attachment,
                                       Modification mod)

limit

public ModifiedPeptideFactory.Builder limit(int varSiteMax)

build

public ModifiedPeptideFactory build()