org.expasy.mzjava.avro.io

Class AbstractPeakListWriter<PL extends PeakList>

java.lang.Object

org.expasy.mzjava.avro.io.AvroIO<AbstractAvroWriter>

org.expasy.mzjava.avro.io.AbstractAvroWriter<PL>

org.expasy.mzjava.avro.io.AbstractPeakListWriter<PL>

All Implemented Interfaces:

AvroExternalizable, AvroWriter<PL>

Direct Known Subclasses:

MsnSpectrumWriter, PeakListWriter, PeptideConsensusSpectrumWriter, PeptideSpectrumWriter

public abstract class AbstractPeakListWriter<PL extends PeakList>
extends AbstractAvroWriter<PL>

Version:

sqrt -1

Author:

Oliver Horlacher

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	AbstractPeakListWriter(com.google.common.base.Optional<PeakList.Precision> precisionOverride, AbstractAvroWriter<? extends PeakAnnotation>... annotationWriters)

Method Summary

Methods

Modifier and Type	Method and Description
protected void	createRecordFields(List<org.apache.avro.Schema.Field> fields) Create a list containing the Schema.Fields for the fields that this class writes
protected void	writePeakList(PeakList peakList, org.apache.avro.io.Encoder out)

Methods inherited from class org.expasy.mzjava.avro.io.AbstractAvroWriter

getRecordName, getRecordNameSpace, writeArray, writeMap, writeMap, writeMap, writeOptional, writeStringArray, writeUnion, writeUnionArray

Methods inherited from class org.expasy.mzjava.avro.io.AvroIO

createEnumSchema, createSchema, createSchemaField, createUnionSchema, createUnionSchema, getRecordDoc, getUnion, registerUnion, rewriteNameSpace

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.expasy.mzjava.avro.io.AvroWriter

write

Methods inherited from interface org.expasy.mzjava.avro.io.AvroExternalizable

createSchema, getObjectClass

Constructor Detail

AbstractPeakListWriter

protected AbstractPeakListWriter(com.google.common.base.Optional<PeakList.Precision> precisionOverride,
                      AbstractAvroWriter<? extends PeakAnnotation>... annotationWriters)

Method Detail

writePeakList

protected void writePeakList(PeakList peakList,
                 org.apache.avro.io.Encoder out)
                      throws IOException

Throws:

IOException

createRecordFields

protected void createRecordFields(List<org.apache.avro.Schema.Field> fields)

Description copied from class: AvroIO

Create a list containing the Schema.Fields for the fields that this class writes

Specified by:

createRecordFields in class AvroIO<AbstractAvroWriter>

Parameters:

fields - the list to add the fields to