Uses of Interface
org.expasy.mzjava.proteomics.ms.ident.ModificationMatchResolver

Packages that use ModificationMatchResolver

Package	Description
org.expasy.mzjava.proteomics.io.ms.ident
org.expasy.mzjava.proteomics.ms.ident

Uses of ModificationMatchResolver in org.expasy.mzjava.proteomics.io.ms.ident

Fields in org.expasy.mzjava.proteomics.io.ms.ident declared as ModificationMatchResolver

Modifier and Type	Field and Description
protected static ModificationMatchResolver	PepXmlReader.CONSTANT_RESOLVER
protected ModificationMatchResolver	PepXmlReader.modMatchResolver

Constructors in org.expasy.mzjava.proteomics.io.ms.ident with parameters of type ModificationMatchResolver

Constructor and Description
PepXmlReader(PepXmlReader.ModMassStorage modMassStorage, boolean discardAmbiguousSequences, ModificationMatchResolver modMatchResolver)

Uses of ModificationMatchResolver in org.expasy.mzjava.proteomics.ms.ident

Classes in org.expasy.mzjava.proteomics.ms.ident that implement ModificationMatchResolver

Modifier and Type	Class and Description
class	ModListModMatchResolver Resolves ModificationMatches against the list of Modifications held by this ModListModMatchResolver.

Methods in org.expasy.mzjava.proteomics.ms.ident with parameters of type ModificationMatchResolver

Modifier and Type	Method and Description
Peptide	PeptideMatch.toPeptide(ModificationMatchResolver modMatchResolver) Convert this PeptideMatch to a peptide using the supplied modificationMatchResolver to convert ModificationMatch instances to Modifications.