org.expasy.mzjava.proteomics.io.ms.spectrum.sptxt

Class SpectraStCommentParser

java.lang.Object

org.expasy.mzjava.proteomics.io.ms.spectrum.sptxt.SpectraStCommentParser

All Implemented Interfaces:

SpectraLibCommentParser

Direct Known Subclasses:

MspCommentParser

public class SpectraStCommentParser
extends Object
implements SpectraLibCommentParser

Version:

sqrt -1

Author:

Oliver Horlacher

Constructor Summary

Constructors

Constructor and Description
SpectraStCommentParser()

Method Summary

Methods

Modifier and Type	Method and Description
boolean	parseComment(String comment, LibrarySpectrumBuilder builder)
protected boolean	parseModsComment(String value, LibrarySpectrumBuilder builder)
protected boolean	parseProteinComment(String value, LibrarySpectrumBuilder builder)
protected boolean	parseUnknownCommentTag(String tag, String value, LibrarySpectrumBuilder builder)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SpectraStCommentParser

public SpectraStCommentParser()

Method Detail

parseComment

public boolean parseComment(String comment,
                   LibrarySpectrumBuilder builder)

Specified by:

parseComment in interface SpectraLibCommentParser

parseModsComment

protected boolean parseModsComment(String value,
                       LibrarySpectrumBuilder builder)

parseProteinComment

protected boolean parseProteinComment(String value,
                          LibrarySpectrumBuilder builder)

parseUnknownCommentTag

protected boolean parseUnknownCommentTag(String tag,
                             String value,
                             LibrarySpectrumBuilder builder)