Uses of Interface
org.expasy.mzjava.core.ms.spectrum.ScanNumber

Packages that use ScanNumber

Package	Description
org.expasy.mzjava.core.io.ms.spectrum
org.expasy.mzjava.core.ms.spectrum
org.expasy.mzjava.external.io.ms.spectrum.mzml
org.expasy.mzjava.proteomics.ms.ident

Uses of ScanNumber in org.expasy.mzjava.core.io.ms.spectrum

Methods in org.expasy.mzjava.core.io.ms.spectrum that return types with arguments of type ScanNumber

Modifier and Type	Method and Description
protected abstract List<ScanNumber>	AbstractMgfWriter.extractScanNumbers(M metaData)
protected List<ScanNumber>	MgfWriter.extractScanNumbers(MsnSpectrum spectrum)

Uses of ScanNumber in org.expasy.mzjava.core.ms.spectrum

Classes in org.expasy.mzjava.core.ms.spectrum that implement ScanNumber

Modifier and Type	Class and Description
class	ScanNumberDiscrete
class	ScanNumberInterval

Fields in org.expasy.mzjava.core.ms.spectrum declared as ScanNumber

Modifier and Type	Field and Description
static ScanNumber	ScanNumber.SCAN_NUMBER_UNKNOWN

Methods in org.expasy.mzjava.core.ms.spectrum that return ScanNumber

Modifier and Type	Method and Description
ScanNumber	ScanNumberList.getFirst() Return the first scan number in this ScanNumberList
ScanNumber	ScanNumberList.getLast() Return the last scan number in this ScanNumberList
ScanNumber	MsnSpectrum.getParentScanNumber() Returns the scan number of the parent scan.

Methods in org.expasy.mzjava.core.ms.spectrum with parameters of type ScanNumber

Modifier and Type	Method and Description
void	MsnSpectrum.addScanNumber(ScanNumber scanNumber) Add scanNumber to this MsnSpectrum
boolean	ScanNumberInterval.contains(ScanNumber scanNumber)
boolean	ScanNumber.contains(ScanNumber scanNumber) Return true if this scan number contains the scanNumber, false otherwise
boolean	ScanNumberDiscrete.contains(ScanNumber scanNumber)
void	MsnSpectrum.setParentScanNumber(ScanNumber parentScanNumber) Set the parent scan number

Method parameters in org.expasy.mzjava.core.ms.spectrum with type arguments of type ScanNumber

Modifier and Type	Method and Description
void	MsnSpectrum.addScanNumbers(Collection<? extends ScanNumber> scanNumbers) Add a all scan numbers from scanNumbers to this MsnSpectrum

Constructors in org.expasy.mzjava.core.ms.spectrum with parameters of type ScanNumber

Constructor and Description
ScanNumberList(ScanNumber... scanNumbers) Construct a ScanNumberList that contains the ScanNumber's in scanNumbers

Uses of ScanNumber in org.expasy.mzjava.external.io.ms.spectrum.mzml

Methods in org.expasy.mzjava.external.io.ms.spectrum.mzml that return types with arguments of type ScanNumber

Modifier and Type	Method and Description
List<ScanNumber>	SpectrumIdParser.parseScanNumbers(String id)
List<ScanNumber>	ScanNumberIncrementer.parseScanNumbers(String id)

Uses of ScanNumber in org.expasy.mzjava.proteomics.ms.ident

Methods in org.expasy.mzjava.proteomics.ms.ident with parameters of type ScanNumber

Modifier and Type	Method and Description
void	SpectrumIdentifier.addScanNumber(ScanNumber scanNumber)