| Package | Description |
|---|---|
| org.expasy.mzjava.core.ms.consensus | |
| org.expasy.mzjava.proteomics.ms.consensus |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractConsensusSpectrumBuilder<A extends LibPeakAnnotation,B extends AbstractConsensusSpectrumBuilder<A,B,C>,C extends ConsensusSpectrum<A>> |
| Modifier and Type | Method and Description |
|---|---|
ConsensusSpectrum<LibPeakAnnotation> |
ConsensusSpectrum.Builder.build() |
ConsensusSpectrum<A> |
ConsensusSpectrum.copy(PeakProcessor<A,A> peakProcessor) |
ConsensusSpectrum<A> |
ConsensusSpectrum.copy(PeakProcessorChain<A> peakProcessorChain) |
ConsensusSpectrum |
ConsensusSpectrum.setPrecursorStats(double precursorMean,
double precursorStdev) |
ConsensusSpectrum |
ConsensusSpectrum.setScoreStats(double simScoreMean,
double simScoreStdev) |
| Modifier and Type | Method and Description |
|---|---|
protected abstract void |
AbstractConsensusSpectrumBuilder.calculatePrecursor(ConsensusSpectrum<? extends LibPeakAnnotation> consensus) |
protected void |
ConsensusSpectrum.Builder.calculatePrecursor(ConsensusSpectrum<? extends LibPeakAnnotation> consensus) |
| Constructor and Description |
|---|
ConsensusPeakSink(ConsensusSpectrum<A> consensus,
double peakFraction,
int minPeakCount) |
ConsensusSpectrum(ConsensusSpectrum<A> consensusSpectrum,
PeakProcessor<A,A> peakProcessor) |
ConsensusSpectrum(ConsensusSpectrum<A> consensusSpectrum,
PeakProcessorChain<A> peakProcessorChain) |
| Modifier and Type | Class and Description |
|---|---|
class |
PeptideConsensusSpectrum |
| Modifier and Type | Method and Description |
|---|---|
protected void |
PeptideConsensusSpectrum.BuilderOld.calculatePrecursor(ConsensusSpectrum<? extends LibPeakAnnotation> consensus) |
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