Uses of Interface
org.expasy.mzjava.proteomics.ms.dbsearch.PeptideSpectrumDB.FragmentDSL

Packages that use PeptideSpectrumDB.FragmentDSL

Package	Description
org.expasy.mzjava.proteomics.ms.dbsearch

Uses of PeptideSpectrumDB.FragmentDSL in org.expasy.mzjava.proteomics.ms.dbsearch

Methods in org.expasy.mzjava.proteomics.ms.dbsearch that return PeptideSpectrumDB.FragmentDSL

Modifier and Type	Method and Description
PeptideSpectrumDB.FragmentDSL	PeptideSpectrumDB.FragmentDSL.cachePeptideSpectrumWith(PeptideSpectrumCache cache)
PeptideSpectrumDB.FragmentDSL	PeptideSpectrumDB.FragmentDSL.processGeneratedSpectraWith(PeakProcessorChain<PepFragAnnotation> processorChain) Set the processorChain that is used to process the generated spectra
PeptideSpectrumDB.FragmentDSL	PeptideSpectrumDB.DigestSourceDSL.setDigestDB(DigestDB digestDB)
PeptideSpectrumDB.FragmentDSL	PeptideSpectrumDB.DigestDSL.setMissedCleavagesTo(int missedCleavages) Set the number of missed cleavages that is allowed by the digester.