Uses of Interface
org.expasy.mzjava.proteomics.ms.dbsearch.PeptideSpectrumDB.EndDSL

Packages that use PeptideSpectrumDB.EndDSL

Package	Description
org.expasy.mzjava.proteomics.ms.dbsearch

Uses of PeptideSpectrumDB.EndDSL in org.expasy.mzjava.proteomics.ms.dbsearch

Methods in org.expasy.mzjava.proteomics.ms.dbsearch that return PeptideSpectrumDB.EndDSL

Modifier and Type	Method and Description
PeptideSpectrumDB.EndDSL	PeptideSpectrumDB.FragmentDSL.generateSequestCidSpectra(PeakList.Precision precision) Creates a new PeptideFragmenter that generates theoretical spectra like SEQUEST does.
PeptideSpectrumDB.EndDSL	PeptideSpectrumDB.FragmentDSL.generateSpectra(PeakList.Precision precision, IonType first, IonType... rest) Set the precision of the spectra and ion types that are generated when a theoretical spectrum is created.
PeptideSpectrumDB.EndDSL	PeptideSpectrumDB.FragmentDSL.generateSpectraWith(PeptideFragmenter peptideFragmenter) Set the PeptideFragmenter that is used to generate the theoretical spectra.
PeptideSpectrumDB.EndDSL	PeptideSpectrumDB.FragmentDSL.generateSpectraWithIons(IonType first, IonType... rest) Creates a new PeptideFragmenter that generates theoretical spectra using the provided ions.