org.expasy.mzjava.proteomics.mol.modification.unimod.jaxb

Class SpecificityT

java.lang.Object

org.expasy.mzjava.proteomics.mol.modification.unimod.jaxb.SpecificityT

public class SpecificityT
extends Object

Java class for specificity_t complex type.

The following schema fragment specifies the expected content contained within this class.

 <complexType name="specificity_t">
   <complexContent>
     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
       <sequence>
         <element name="NeutralLoss" type="{http://www.unimod.org/xmlns/schema/unimod_2}NeutralLoss_t" maxOccurs="unbounded" minOccurs="0"/>
         <element name="PepNeutralLoss" type="{http://www.unimod.org/xmlns/schema/unimod_2}PepNeutralLoss_t" maxOccurs="unbounded" minOccurs="0"/>
         <element name="misc_notes" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/>
       </sequence>
       <attribute name="hidden" type="{http://www.w3.org/2001/XMLSchema}boolean" default="false" />
       <attribute name="site" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
       <attribute name="position" use="required" type="{http://www.unimod.org/xmlns/schema/unimod_2}position_t" />
       <attribute name="classification" use="required" type="{http://www.unimod.org/xmlns/schema/unimod_2}classification_t" />
       <attribute name="spec_group" type="{http://www.w3.org/2001/XMLSchema}integer" default="1" />
     </restriction>
   </complexContent>
 </complexType>
 

Field Summary

Fields

Modifier and Type	Field and Description
protected String	classification
protected Boolean	hidden
protected String	miscNotes
protected List<NeutralLossT>	neutralLoss
protected List<PepNeutralLossT>	pepNeutralLoss
protected PositionT	position
protected String	site
protected int	specGroup

Constructor Summary

Constructors

Constructor and Description
SpecificityT()

Method Summary

Methods

Modifier and Type	Method and Description
String	getClassification() Gets the value of the classification property.
String	getMiscNotes() Gets the value of the miscNotes property.
List<NeutralLossT>	getNeutralLoss() Gets the value of the neutralLoss property.
List<PepNeutralLossT>	getPepNeutralLoss() Gets the value of the pepNeutralLoss property.
PositionT	getPosition() Gets the value of the position property.
String	getSite() Gets the value of the site property.
int	getSpecGroup() Gets the value of the specGroup property.
boolean	isHidden() Gets the value of the hidden property.
void	setClassification(String value) Sets the value of the classification property.
void	setHidden(Boolean value) Sets the value of the hidden property.
void	setMiscNotes(String value) Sets the value of the miscNotes property.
void	setPosition(PositionT value) Sets the value of the position property.
void	setSite(String value) Sets the value of the site property.
void	setSpecGroup(int value) Sets the value of the specGroup property.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

neutralLoss

protected List<NeutralLossT> neutralLoss

pepNeutralLoss

protected List<PepNeutralLossT> pepNeutralLoss

miscNotes

protected String miscNotes

hidden

protected Boolean hidden

site

protected String site

position

protected PositionT position

classification

protected String classification

specGroup

protected int specGroup

Constructor Detail

SpecificityT

public SpecificityT()

Method Detail

getNeutralLoss

public List<NeutralLossT> getNeutralLoss()

Gets the value of the neutralLoss property.

This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the neutralLoss property.

For example, to add a new item, do as follows:

    getNeutralLoss().add(newItem);
 

Objects of the following type(s) are allowed in the list NeutralLossT

getPepNeutralLoss

public List<PepNeutralLossT> getPepNeutralLoss()

Gets the value of the pepNeutralLoss property.

This accessor method returns a reference to the live list, not a snapshot. Therefore any modification you make to the returned list will be present inside the JAXB object. This is why there is not a set method for the pepNeutralLoss property.

For example, to add a new item, do as follows:

    getPepNeutralLoss().add(newItem);
 

Objects of the following type(s) are allowed in the list PepNeutralLossT

getMiscNotes

public String getMiscNotes()

Gets the value of the miscNotes property.

Returns:

possible object is String

setMiscNotes

public void setMiscNotes(String value)

Sets the value of the miscNotes property.

Parameters:

value - allowed object is String

isHidden

public boolean isHidden()

Gets the value of the hidden property.

Returns:

possible object is Boolean

setHidden

public void setHidden(Boolean value)

Sets the value of the hidden property.

Parameters:

value - allowed object is Boolean

getSite

public String getSite()

Gets the value of the site property.

Returns:

possible object is String

setSite

public void setSite(String value)

Sets the value of the site property.

Parameters:

value - allowed object is String

getPosition

public PositionT getPosition()

Gets the value of the position property.

Returns:

possible object is PositionT

setPosition

public void setPosition(PositionT value)

Sets the value of the position property.

Parameters:

value - allowed object is PositionT

getClassification

public String getClassification()

Gets the value of the classification property.

Returns:

possible object is String

setClassification

public void setClassification(String value)

Sets the value of the classification property.

Parameters:

value - allowed object is String

getSpecGroup

public int getSpecGroup()

Gets the value of the specGroup property.

Returns:

possible object is BigInteger

setSpecGroup

public void setSpecGroup(int value)

Sets the value of the specGroup property.

Parameters:

value - allowed object is BigInteger