public class ObjectFactory extends Object
An ObjectFactory allows you to programatically construct new instances of the Java representation for XML content. The Java representation of XML content can consist of schema derived interfaces and classes representing the binding of schema type definitions, element declarations and model groups. Factory methods for each of these are provided in this class.
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ObjectFactory()
Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: org.expasy.mzjava.proteomics.io.ms.liberator.pepxml.v117
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public ObjectFactory()
public LibraResult createLibraResult()
LibraResultpublic LibraResult.Intensity createLibraResultIntensity()
LibraResult.Intensitypublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.AlternativeProtein createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitAlternativeProtein()
public XpressratioTimestamp createXpressratioTimestamp()
XpressratioTimestamppublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary createMsmsPipelineAnalysisMsmsRunSummarySearchSummary()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummarypublic MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzyme createMsmsPipelineAnalysisMsmsRunSummarySampleEnzyme()
MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzymepublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SequenceSearchConstraint createMsmsPipelineAnalysisMsmsRunSummarySearchSummarySequenceSearchConstraint()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SequenceSearchConstraintpublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHit()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHitpublic LibraSummary createLibraSummary()
LibraSummarypublic MsmsPipelineAnalysis.MsmsRunSummary createMsmsPipelineAnalysisMsmsRunSummary()
MsmsPipelineAnalysis.MsmsRunSummarypublic PeptideprophetResult.SearchScoreSummary createPeptideprophetResultSearchScoreSummary()
PeptideprophetResult.SearchScoreSummarypublic LibraSummary.IsotopicContributions.ContributingChannel.AffectedChannel createLibraSummaryIsotopicContributionsContributingChannelAffectedChannel()
LibraSummary.IsotopicContributions.ContributingChannel.AffectedChannelpublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.AminoacidModification createMsmsPipelineAnalysisMsmsRunSummarySearchSummaryAminoacidModification()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.AminoacidModificationpublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuery()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuerypublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.ModificationInfo.ModAminoacidMass createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitModificationInfoModAminoacidMass()
public MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.TerminalModification createMsmsPipelineAnalysisMsmsRunSummarySearchSummaryTerminalModification()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.TerminalModificationpublic LibraSummary.IsotopicContributions.ContributingChannel createLibraSummaryIsotopicContributionsContributingChannel()
LibraSummary.IsotopicContributions.ContributingChannelpublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SearchDatabase createMsmsPipelineAnalysisMsmsRunSummarySearchSummarySearchDatabase()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SearchDatabasepublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.AnalysisResult createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitAnalysisResult()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.AnalysisResultpublic MsmsPipelineAnalysis.DatasetDerivation.DataFilter createMsmsPipelineAnalysisDatasetDerivationDataFilter()
MsmsPipelineAnalysis.DatasetDerivation.DataFilterpublic AsapratioLcHeavypeak createAsapratioLcHeavypeak()
AsapratioLcHeavypeakpublic AsapratioPeptideData createAsapratioPeptideData()
AsapratioPeptideDatapublic MsmsPipelineAnalysis.AnalysisSummary createMsmsPipelineAnalysisAnalysisSummary()
MsmsPipelineAnalysis.AnalysisSummarypublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.ModificationInfo createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitModificationInfo()
public XpressratioResult createXpressratioResult()
XpressratioResultpublic MsmsPipelineAnalysis.DatasetDerivation createMsmsPipelineAnalysisDatasetDerivation()
MsmsPipelineAnalysis.DatasetDerivationpublic XpressratioSummary createXpressratioSummary()
XpressratioSummarypublic LibraSummary.IsotopicContributions createLibraSummaryIsotopicContributions()
LibraSummary.IsotopicContributionspublic InteractSummary.Inputfile createInteractSummaryInputfile()
InteractSummary.Inputfilepublic AsapratioTimestamp createAsapratioTimestamp()
AsapratioTimestamppublic AsapratioSummary createAsapratioSummary()
AsapratioSummarypublic DatabaseRefreshTimestamp createDatabaseRefreshTimestamp()
DatabaseRefreshTimestamppublic AsapratioLcLightpeak createAsapratioLcLightpeak()
AsapratioLcLightpeakpublic LibraSummary.FragmentMasses createLibraSummaryFragmentMasses()
LibraSummary.FragmentMassespublic AsapratioResult createAsapratioResult()
AsapratioResultpublic PeptideprophetResult createPeptideprophetResult()
PeptideprophetResultpublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.EnzymaticSearchConstraint createMsmsPipelineAnalysisMsmsRunSummarySearchSummaryEnzymaticSearchConstraint()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.EnzymaticSearchConstraintpublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResult()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResultpublic InteractSummary createInteractSummary()
InteractSummarypublic AsapratioContribution createAsapratioContribution()
AsapratioContributionpublic MsmsPipelineAnalysis createMsmsPipelineAnalysis()
MsmsPipelineAnalysispublic MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzyme.Specificity createMsmsPipelineAnalysisMsmsRunSummarySampleEnzymeSpecificity()
MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzyme.Specificitypublic MsmsPipelineAnalysis.MsmsRunSummary.AnalysisTimestamp createMsmsPipelineAnalysisMsmsRunSummaryAnalysisTimestamp()
MsmsPipelineAnalysis.MsmsRunSummary.AnalysisTimestamppublic NameValueType createNameValueType()
NameValueTypepublic JAXBElement<Object> createPeptideprophetSummary(Object value)
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