org.expasy.mzjava.proteomics.io.ms.ident.mzidentml.v110

Class ObjectFactory

java.lang.Object

org.expasy.mzjava.proteomics.io.ms.ident.mzidentml.v110.ObjectFactory

public class ObjectFactory
extends Object

This object contains factory methods for each Java content interface and Java element interface generated in the org.expasy.mzjava.proteomics.io.ms.liberator.mzidentml.v110 package.

An ObjectFactory allows you to programatically construct new instances of the Java representation for XML content. The Java representation of XML content can consist of schema derived interfaces and classes representing the binding of schema type definitions, element declarations and model groups. Factory methods for each of these are provided in this class.

Constructor Summary

Constructors

Constructor and Description
ObjectFactory() Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: org.expasy.mzjava.proteomics.io.ms.liberator.mzidentml.v110

Method Summary

Methods

Modifier and Type	Method and Description
AffiliationType	createAffiliationType() Create an instance of AffiliationType
AmbiguousResidueType	createAmbiguousResidueType() Create an instance of AmbiguousResidueType
AnalysisCollectionType	createAnalysisCollectionType() Create an instance of AnalysisCollectionType
AnalysisDataType	createAnalysisDataType() Create an instance of AnalysisDataType
AnalysisProtocolCollectionType	createAnalysisProtocolCollectionType() Create an instance of AnalysisProtocolCollectionType
AnalysisSampleCollectionType	createAnalysisSampleCollectionType() Create an instance of AnalysisSampleCollectionType
AnalysisSoftwareListType	createAnalysisSoftwareListType() Create an instance of AnalysisSoftwareListType
AnalysisSoftwareType	createAnalysisSoftwareType() Create an instance of AnalysisSoftwareType
AuditCollectionType	createAuditCollectionType() Create an instance of AuditCollectionType
BibliographicReferenceType	createBibliographicReferenceType() Create an instance of BibliographicReferenceType
ContactRoleType	createContactRoleType() Create an instance of ContactRoleType
CVListType	createCVListType() Create an instance of CVListType
CVParamType	createCVParamType() Create an instance of CVParamType
CvType	createCvType() Create an instance of CvType
DatabaseFiltersType	createDatabaseFiltersType() Create an instance of DatabaseFiltersType
DatabaseTranslationType	createDatabaseTranslationType() Create an instance of DatabaseTranslationType
DataCollectionType	createDataCollectionType() Create an instance of DataCollectionType
DBSequenceType	createDBSequenceType() Create an instance of DBSequenceType
EnzymesType	createEnzymesType() Create an instance of EnzymesType
EnzymeType	createEnzymeType() Create an instance of EnzymeType
ExternalDataType	createExternalDataType() Create an instance of ExternalDataType
FileFormatType	createFileFormatType() Create an instance of FileFormatType
FilterType	createFilterType() Create an instance of FilterType
FragmentArrayType	createFragmentArrayType() Create an instance of FragmentArrayType
FragmentationTableType	createFragmentationTableType() Create an instance of FragmentationTableType
FragmentationType	createFragmentationType() Create an instance of FragmentationType
InputSpectraType	createInputSpectraType() Create an instance of InputSpectraType
InputSpectrumIdentificationsType	createInputSpectrumIdentificationsType() Create an instance of InputSpectrumIdentificationsType
InputsType	createInputsType() Create an instance of InputsType
IonTypeType	createIonTypeType() Create an instance of IonTypeType
MassTableType	createMassTableType() Create an instance of MassTableType
MeasureType	createMeasureType() Create an instance of MeasureType
ModificationParamsType	createModificationParamsType() Create an instance of ModificationParamsType
ModificationType	createModificationType() Create an instance of ModificationType
JAXBElement<MzIdentMLType>	createMzIdentML(MzIdentMLType value) Create an instance of JAXBElement<MzIdentMLType>}
MzIdentMLType	createMzIdentMLType() Create an instance of MzIdentMLType
OrganizationType	createOrganizationType() Create an instance of OrganizationType
ParamListType	createParamListType() Create an instance of ParamListType
ParamType	createParamType() Create an instance of ParamType
ParentOrganizationType	createParentOrganizationType() Create an instance of ParentOrganizationType
PeptideEvidenceRefType	createPeptideEvidenceRefType() Create an instance of PeptideEvidenceRefType
PeptideEvidenceType	createPeptideEvidenceType() Create an instance of PeptideEvidenceType
PeptideHypothesisType	createPeptideHypothesisType() Create an instance of PeptideHypothesisType
PeptideType	createPeptideType() Create an instance of PeptideType
PersonType	createPersonType() Create an instance of PersonType
ProteinAmbiguityGroupType	createProteinAmbiguityGroupType() Create an instance of ProteinAmbiguityGroupType
ProteinDetectionHypothesisType	createProteinDetectionHypothesisType() Create an instance of ProteinDetectionHypothesisType
ProteinDetectionListType	createProteinDetectionListType() Create an instance of ProteinDetectionListType
ProteinDetectionProtocolType	createProteinDetectionProtocolType() Create an instance of ProteinDetectionProtocolType
ProteinDetectionType	createProteinDetectionType() Create an instance of ProteinDetectionType
ProviderType	createProviderType() Create an instance of ProviderType
ResidueType	createResidueType() Create an instance of ResidueType
RoleType	createRoleType() Create an instance of RoleType
SampleType	createSampleType() Create an instance of SampleType
SearchDatabaseRefType	createSearchDatabaseRefType() Create an instance of SearchDatabaseRefType
SearchDatabaseType	createSearchDatabaseType() Create an instance of SearchDatabaseType
SearchModificationType	createSearchModificationType() Create an instance of SearchModificationType
SequenceCollectionType	createSequenceCollectionType() Create an instance of SequenceCollectionType
SourceFileType	createSourceFileType() Create an instance of SourceFileType
SpecificityRulesType	createSpecificityRulesType() Create an instance of SpecificityRulesType
SpectraDataType	createSpectraDataType() Create an instance of SpectraDataType
SpectrumIdentificationItemRefType	createSpectrumIdentificationItemRefType() Create an instance of SpectrumIdentificationItemRefType
SpectrumIdentificationItemType	createSpectrumIdentificationItemType() Create an instance of SpectrumIdentificationItemType
SpectrumIdentificationListType	createSpectrumIdentificationListType() Create an instance of SpectrumIdentificationListType
SpectrumIdentificationProtocolType	createSpectrumIdentificationProtocolType() Create an instance of SpectrumIdentificationProtocolType
SpectrumIdentificationResultType	createSpectrumIdentificationResultType() Create an instance of SpectrumIdentificationResultType
SpectrumIdentificationType	createSpectrumIdentificationType() Create an instance of SpectrumIdentificationType
SpectrumIDFormatType	createSpectrumIDFormatType() Create an instance of SpectrumIDFormatType
SubSampleType	createSubSampleType() Create an instance of SubSampleType
SubstitutionModificationType	createSubstitutionModificationType() Create an instance of SubstitutionModificationType
ToleranceType	createToleranceType() Create an instance of ToleranceType
TranslationTableType	createTranslationTableType() Create an instance of TranslationTableType
UserParamType	createUserParamType() Create an instance of UserParamType

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ObjectFactory

public ObjectFactory()

Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: org.expasy.mzjava.proteomics.io.ms.liberator.mzidentml.v110

Method Detail

createMzIdentMLType

public MzIdentMLType createMzIdentMLType()

Create an instance of MzIdentMLType

createResidueType

public ResidueType createResidueType()

Create an instance of ResidueType

createParamType

public ParamType createParamType()

Create an instance of ParamType

createAmbiguousResidueType

public AmbiguousResidueType createAmbiguousResidueType()

Create an instance of AmbiguousResidueType

createCVParamType

public CVParamType createCVParamType()

Create an instance of CVParamType

createEnzymeType

public EnzymeType createEnzymeType()

Create an instance of EnzymeType

createDatabaseTranslationType

public DatabaseTranslationType createDatabaseTranslationType()

Create an instance of DatabaseTranslationType

createInputsType

public InputsType createInputsType()

Create an instance of InputsType

createUserParamType

public UserParamType createUserParamType()

Create an instance of UserParamType

createFragmentationType

public FragmentationType createFragmentationType()

Create an instance of FragmentationType

createSpectraDataType

public SpectraDataType createSpectraDataType()

Create an instance of SpectraDataType

createIonTypeType

public IonTypeType createIonTypeType()

Create an instance of IonTypeType

createTranslationTableType

public TranslationTableType createTranslationTableType()

Create an instance of TranslationTableType

createSpectrumIdentificationItemRefType

public SpectrumIdentificationItemRefType createSpectrumIdentificationItemRefType()

Create an instance of SpectrumIdentificationItemRefType

createParamListType

public ParamListType createParamListType()

Create an instance of ParamListType

createAnalysisSoftwareType

public AnalysisSoftwareType createAnalysisSoftwareType()

Create an instance of AnalysisSoftwareType

createPeptideEvidenceRefType

public PeptideEvidenceRefType createPeptideEvidenceRefType()

Create an instance of PeptideEvidenceRefType

createAnalysisCollectionType

public AnalysisCollectionType createAnalysisCollectionType()

Create an instance of AnalysisCollectionType

createSpecificityRulesType

public SpecificityRulesType createSpecificityRulesType()

Create an instance of SpecificityRulesType

createBibliographicReferenceType

public BibliographicReferenceType createBibliographicReferenceType()

Create an instance of BibliographicReferenceType

createExternalDataType

public ExternalDataType createExternalDataType()

Create an instance of ExternalDataType

createProteinDetectionListType

public ProteinDetectionListType createProteinDetectionListType()

Create an instance of ProteinDetectionListType

createPeptideHypothesisType

public PeptideHypothesisType createPeptideHypothesisType()

Create an instance of PeptideHypothesisType

createModificationType

public ModificationType createModificationType()

Create an instance of ModificationType

createFileFormatType

public FileFormatType createFileFormatType()

Create an instance of FileFormatType

createSpectrumIdentificationType

public SpectrumIdentificationType createSpectrumIdentificationType()

Create an instance of SpectrumIdentificationType

createInputSpectrumIdentificationsType

public InputSpectrumIdentificationsType createInputSpectrumIdentificationsType()

Create an instance of InputSpectrumIdentificationsType

createPeptideType

public PeptideType createPeptideType()

Create an instance of PeptideType

createFragmentArrayType

public FragmentArrayType createFragmentArrayType()

Create an instance of FragmentArrayType

createSourceFileType

public SourceFileType createSourceFileType()

Create an instance of SourceFileType

createDBSequenceType

public DBSequenceType createDBSequenceType()

Create an instance of DBSequenceType

createSpectrumIDFormatType

public SpectrumIDFormatType createSpectrumIDFormatType()

Create an instance of SpectrumIDFormatType

createModificationParamsType

public ModificationParamsType createModificationParamsType()

Create an instance of ModificationParamsType

createSpectrumIdentificationListType

public SpectrumIdentificationListType createSpectrumIdentificationListType()

Create an instance of SpectrumIdentificationListType

createSequenceCollectionType

public SequenceCollectionType createSequenceCollectionType()

Create an instance of SequenceCollectionType

createMassTableType

public MassTableType createMassTableType()

Create an instance of MassTableType

createDatabaseFiltersType

public DatabaseFiltersType createDatabaseFiltersType()

Create an instance of DatabaseFiltersType

createProteinAmbiguityGroupType

public ProteinAmbiguityGroupType createProteinAmbiguityGroupType()

Create an instance of ProteinAmbiguityGroupType

createAnalysisSampleCollectionType

public AnalysisSampleCollectionType createAnalysisSampleCollectionType()

Create an instance of AnalysisSampleCollectionType

createParentOrganizationType

public ParentOrganizationType createParentOrganizationType()

Create an instance of ParentOrganizationType

createSubstitutionModificationType

public SubstitutionModificationType createSubstitutionModificationType()

Create an instance of SubstitutionModificationType

createEnzymesType

public EnzymesType createEnzymesType()

Create an instance of EnzymesType

createSubSampleType

public SubSampleType createSubSampleType()

Create an instance of SubSampleType

createPersonType

public PersonType createPersonType()

Create an instance of PersonType

createMeasureType

public MeasureType createMeasureType()

Create an instance of MeasureType

createProteinDetectionProtocolType

public ProteinDetectionProtocolType createProteinDetectionProtocolType()

Create an instance of ProteinDetectionProtocolType

createSpectrumIdentificationItemType

public SpectrumIdentificationItemType createSpectrumIdentificationItemType()

Create an instance of SpectrumIdentificationItemType

createContactRoleType

public ContactRoleType createContactRoleType()

Create an instance of ContactRoleType

createToleranceType

public ToleranceType createToleranceType()

Create an instance of ToleranceType

createSampleType

public SampleType createSampleType()

Create an instance of SampleType

createDataCollectionType

public DataCollectionType createDataCollectionType()

Create an instance of DataCollectionType

createCvType

public CvType createCvType()

Create an instance of CvType

createPeptideEvidenceType

public PeptideEvidenceType createPeptideEvidenceType()

Create an instance of PeptideEvidenceType

createSearchModificationType

public SearchModificationType createSearchModificationType()

Create an instance of SearchModificationType

createAuditCollectionType

public AuditCollectionType createAuditCollectionType()

Create an instance of AuditCollectionType

createSearchDatabaseRefType

public SearchDatabaseRefType createSearchDatabaseRefType()

Create an instance of SearchDatabaseRefType

createSpectrumIdentificationResultType

public SpectrumIdentificationResultType createSpectrumIdentificationResultType()

Create an instance of SpectrumIdentificationResultType

createProteinDetectionHypothesisType

public ProteinDetectionHypothesisType createProteinDetectionHypothesisType()

Create an instance of ProteinDetectionHypothesisType

createFragmentationTableType

public FragmentationTableType createFragmentationTableType()

Create an instance of FragmentationTableType

createSearchDatabaseType

public SearchDatabaseType createSearchDatabaseType()

Create an instance of SearchDatabaseType

createAnalysisSoftwareListType

public AnalysisSoftwareListType createAnalysisSoftwareListType()

Create an instance of AnalysisSoftwareListType

createSpectrumIdentificationProtocolType

public SpectrumIdentificationProtocolType createSpectrumIdentificationProtocolType()

Create an instance of SpectrumIdentificationProtocolType

createAffiliationType

public AffiliationType createAffiliationType()

Create an instance of AffiliationType

createCVListType

public CVListType createCVListType()

Create an instance of CVListType

createAnalysisDataType

public AnalysisDataType createAnalysisDataType()

Create an instance of AnalysisDataType

createInputSpectraType

public InputSpectraType createInputSpectraType()

Create an instance of InputSpectraType

createAnalysisProtocolCollectionType

public AnalysisProtocolCollectionType createAnalysisProtocolCollectionType()

Create an instance of AnalysisProtocolCollectionType

createOrganizationType

public OrganizationType createOrganizationType()

Create an instance of OrganizationType

createRoleType

public RoleType createRoleType()

Create an instance of RoleType

createFilterType

public FilterType createFilterType()

Create an instance of FilterType

createProviderType

public ProviderType createProviderType()

Create an instance of ProviderType

createProteinDetectionType

public ProteinDetectionType createProteinDetectionType()

Create an instance of ProteinDetectionType

createMzIdentML

public JAXBElement<MzIdentMLType> createMzIdentML(MzIdentMLType value)

Create an instance of JAXBElement<MzIdentMLType>}