org.expasy.mzjava.external.io.ms.spectrum.mzml

Class LastMzCheck

java.lang.Object

org.expasy.mzjava.external.io.ms.spectrum.mzml.MzmlSpectrumCheck

org.expasy.mzjava.external.io.ms.spectrum.mzml.LastMzCheck

All Implemented Interfaces:

ConsistencyCheck

public class LastMzCheck
extends MzmlSpectrumCheck

Constructor Summary

Constructors

Constructor and Description
LastMzCheck()

Method Summary

Methods

Modifier and Type	Method and Description
com.google.common.base.Optional<Double>	getExpectedValue(uk.ac.ebi.jmzml.model.mzml.Spectrum mzmlSpectrum) Get expected value from a container
com.google.common.base.Optional<Double>	getObservedValue(MsnSpectrum spectrum) Get observed value from an MsnSpectrum

Methods inherited from class org.expasy.mzjava.external.io.ms.spectrum.mzml.MzmlSpectrumCheck

assertConsistent, checkConsistency, getExpectedValue, onFailSendWarning, onFailThrowException, setName

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LastMzCheck

public LastMzCheck()

Method Detail

getExpectedValue

public com.google.common.base.Optional<Double> getExpectedValue(uk.ac.ebi.jmzml.model.mzml.Spectrum mzmlSpectrum)

Description copied from interface: ConsistencyCheck

Get expected value from a container

Parameters:

mzmlSpectrum - potentially contains expected value

Returns:

an optional value

getObservedValue

public com.google.common.base.Optional<Double> getObservedValue(MsnSpectrum spectrum)

Description copied from interface: ConsistencyCheck

Get observed value from an MsnSpectrum

Parameters:

spectrum - the spectrum container

Returns:

the optional observed value to check for consistency