org.expasy.mzjava.core.ms.library

Class DefaultSpectrumLibrary<S extends PeakList>

java.lang.Object

org.expasy.mzjava.core.ms.library.AbstractMapSpectrumLibrary<S>

org.expasy.mzjava.core.ms.library.AbstractIntervalSpectrumLibrary<S>

org.expasy.mzjava.core.ms.library.DefaultSpectrumLibrary<S>

All Implemented Interfaces:

SpectrumLibrary<S>

public class DefaultSpectrumLibrary<S extends PeakList>
extends AbstractIntervalSpectrumLibrary<S>

Version:

sqrt -1

Author:

Oliver Horlacher

Field Summary

Fields inherited from class org.expasy.mzjava.core.ms.library.AbstractMapSpectrumLibrary

maps

Constructor Summary

Constructors

Constructor and Description
DefaultSpectrumLibrary(Tolerance tolerance, Collection<S> spectra)

Method Summary

Methods

Modifier and Type	Method and Description
protected Peak	newFromPeak(double mz, int charge)
protected Peak	newToPeak(double mz, int charge)

Methods inherited from class org.expasy.mzjava.core.ms.library.AbstractIntervalSpectrumLibrary

forEach

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DefaultSpectrumLibrary

public DefaultSpectrumLibrary(Tolerance tolerance,
                      Collection<S> spectra)

Method Detail

newFromPeak

protected Peak newFromPeak(double mz,
               int charge)

Specified by:

newFromPeak in class AbstractIntervalSpectrumLibrary<S extends PeakList>

newToPeak

protected Peak newToPeak(double mz,
             int charge)

Specified by:

newToPeak in class AbstractIntervalSpectrumLibrary<S extends PeakList>