Uses of Interface
org.expasy.mzjava.core.ms.cluster.SimilarityGraphBuilder

Packages that use SimilarityGraphBuilder

Package	Description
org.expasy.mzjava.core.ms.cluster

Uses of SimilarityGraphBuilder in org.expasy.mzjava.core.ms.cluster

Classes in org.expasy.mzjava.core.ms.cluster that implement SimilarityGraphBuilder

Modifier and Type	Class and Description
protected static class	DenseSimilarityGraph.AbstractBuilder<V,G extends SimilarityGraph<V>>
static class	DenseSimilarityGraph.Builder<V>
static class	SparseSimilarityGraph.Builder<V>

Methods in org.expasy.mzjava.core.ms.cluster that return SimilarityGraphBuilder

Modifier and Type	Method and Description
SimilarityGraphBuilder<V,G>	DenseSimilarityGraph.AbstractBuilder.add(SimEdge<V> simEdge)
SimilarityGraphBuilder<V,G>	SimilarityGraphBuilder.add(SimEdge<V> simEdge) Add the simEdge to the graph.
SimilarityGraphBuilder<V,G>	DenseSimilarityGraph.AbstractBuilder.add(V vertex)
SimilarityGraphBuilder<V,G>	SimilarityGraphBuilder.add(V vertex) Add the vertex to the graph

Methods in org.expasy.mzjava.core.ms.cluster with parameters of type SimilarityGraphBuilder

Modifier and Type	Method and Description
static <A extends PeakAnnotation,S extends PeakList<A>,G extends SimilarityGraph<S>> G	PeakListSimGraphFactory.build(List<S> spectra, SimilarityGraphBuilder<S,G> builder, SimFunc<A,A> simFunc, Tolerance precursorTolerance, double scoreThreshold) Build a new SimilarityGraph