org.expasy.mzjava.core.ms

Class PpmTolerance

java.lang.Object

org.expasy.mzjava.core.ms.Tolerance

org.expasy.mzjava.core.ms.PpmTolerance

public class PpmTolerance
extends Tolerance

Version:

sqrt -1

Author:

Oliver Horlacher

Nested Class Summary

Nested classes/interfaces inherited from class org.expasy.mzjava.core.ms.Tolerance

Tolerance.Location

Constructor Summary

Constructors

Constructor and Description
PpmTolerance(double errorPPM)

Method Summary

Methods

Modifier and Type	Method and Description
Tolerance.Location	check(double expected, double actual)
double	getError(double expectedMr, double actualMr)
double	getMax(double mz)
double	getMin(double mz)
boolean	withinTolerance(double expected, double actual) Returns true if the actual is within tolerance of the expected

Methods inherited from class org.expasy.mzjava.core.ms.Tolerance

check

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PpmTolerance

public PpmTolerance(double errorPPM)

Method Detail

withinTolerance

public boolean withinTolerance(double expected,
                      double actual)

Description copied from class: Tolerance

Returns true if the actual is within tolerance of the expected

Specified by:

withinTolerance in class Tolerance

Parameters:

expected - the expected m/z

actual - the actual m/z

Returns:

true if the actual is within tolerance of the expected

getError

public double getError(double expectedMr,
              double actualMr)

Specified by:

getError in class Tolerance

check

public Tolerance.Location check(double expected,
                       double actual)

Specified by:

check in class Tolerance

getMin

public double getMin(double mz)

Specified by:

getMin in class Tolerance

getMax

public double getMax(double mz)

Specified by:

getMax in class Tolerance